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  181. Sezer, E., Osken, I., Cinar, M.E., Demirel, O., Ustamehmetoglu, B. and Ozturk, T. (2016) Synthesis and Electropolymerization of Bis(phenylthieno[3,2-b]thiophenes)- (4,4 ‘-dinonyl-2,2 ‘-bithiazole) co-monomer, ELECTROCHIMICA ACTA, 222, 1592-1603, http://dx.doi.org/10.1016/j.electacta.2016.11.145
  182. Kayik, G., Tuzun, N.S. and Durdagi, S. (2017) Investigation of PDE5/PDE6 and PDE5/PDE11 selective potent tadalafil-like PDE5 inhibitors using combination of molecular modeling approaches, molecular fingerprint-based virtual screening protocols and structure-based pharmacophore development, JOURNAL OF ENZYME INHIBITION AND MEDICINAL CHEMISTRY, 32 (1), 311-330, http://dx.doi.org/10.1080/14756366.2016.1250756
  183. Onat, B., Hallioglu, L., Ipek, S. and Durgun, E. (2017) Tuning Electronic Properties of Monolayer Hexagonal Boron Phosphide with Group III-IV-V Dopants, JOURNAL OF PHYSICAL CHEMISTRY C, 121 (8), 4583-4592, http://dx.doi.org/10.1021/acs.jpcc.6b10334
  184. Gurkan, YY., Kasapbasi, E., Turkten, N and Cinar, Z. (2017). Influence of Se/N Codoping on the Structural, Optical, Electronic and Photocatalytic Properties of TiO2, Molecules, 22 (3). http://dx.doi.org/3390/molecules22030414
  185. Ustamehmetoglu, B., Osken, I., Cinar, M.E., Sezer, E., Karaca, E. and Ozturk, T. (2017). Synthesis and Characterization of Dithienothiophene, Bithiazole and Thiophene Containing Polymer, Electrochimica Acta, 227, 435-446. http://dx.doi.org/1016/j.electacta.2016.12.153
  186. Donmez, O. (2017). Investigating the instability of the torus around the black hole in the presence of the radial and angular velocity perturbations, Turkish Journal of Physics, 41 (1), 25-40. http://dx.doi.org/3906/fiz-1604-12 2017
  187. Buyruk, A., Cinar, M.E., Eroglu, M.S. and Ozturk, T. (2017). Polymerization of Thienothiophenes and Dithienothiophenes via Click-Reaction for Electronic Applications, Chemistryselect, 1 (12), 3028-3032. http://dx.doi.org/1002/slct.201600697
  188. Allushi, A., Kutahya, C., Aydogan, C., Kreutzer, J., Yilmaz, G. and Yagci, Y. (2017). Conventional Type II photoinitiators as activators for photoinduced metal-free atom transfer radical polymerization, Polymer Chemistry, 8 (12), 1972-1977. http://dx.doi.org/1039/c7py00114b
  189. Demirci, S., Avazli, N., Durgun, E. and Cahangirov, S. (2017). Structural and electronic properties of monolayer group III monochalcogenides, Physical Review B, 95 (11). http://dx.doi.org/10.1103/PhysRevB.95.115409
  190.  Turuncoglu, U.U. and Sannino, G. (2017). Validation of newly designed regional earth system model (RegESM) for Mediterranean Basin, Climate Dynamics, 48 (9), 2919-2947. http://dx.doi.org/10.1007/s00382-016-3241-1
  191.  Sahin, O., Cinar, M.E., Tekin, E., Mucur, S.P., Topal, S., Suna, G., Eroglu, M.S. and Ozturk, T. (2017). White Light Emitting Polymers Possessing Thienothiophene and Boron Units, Chemistryselect, 2 (10),2889-2894. http://dx.doi.org/10.1002/slct.2017001742
  192. Turkoglu, G., Cinar, M.E. and Ozturk, T. (2017). Organoboron copolymers containing thienothiophene and selenophenothiophene analogues: optical, electrochemical and fluoride sensing properties, RSC ADVANCES, 7 (37), 23197-23207. http://dx.doi.org/10.1039/c7ra01793f3
  193. Onen, A., Kecik, D., Durgun, E. and Ciraci, S. (2017). In-plane commensurate GaN/AlN junctions: Single-layer composite structures, single and multiple quantum wells and quantum dots, Physical Review B, 95 (15). http://dx.doi.org/10.1103/PhysRevB.95.155435
  194. Ugur, I., Cinar, S.A., Dedeoglu, B., Aviyente, V., Hawthorne, M.F., Liu, P., Liu, F., Houk, K.N. and Jimenez-Oses, G. (2017. 1,3-Dipolar Cycloaddition Reactions of Low-Valent Rhodium and Iridium Complexes with Arylnitrile N-Oxides, Journal of Organic Chemistry, 82 (10), 5096-5101, http://dx.doi.org/10.1021/acs.joc.7b00282
  195. Yildiz, G., Aydogmus, Z., Cinar, M.E., Senkal, F. and Ozturk, T. (2017). Electrochemical oxidation mechanism of eugenol on graphene modified carbon paste electrode and its analytical application to pharmaceutical analysis, TALANTA, 173, 1-8, http://dx.doi.org/10.1016/jtalanta.2017.05.056
  196. Eken, A. and Sahin, M. (2017). A parallel monolithic approach for fluid-structure interaction in a cerebral aneurysm, Computers & Fluids, 153, 61-75; http://dx.doi.org/10.1016/j.compfluid.2017.05.005
  197. Celebi, M.S., Duran, A., Oztoprak, F., Tuncel, M. and Akaydin, B. (2017). On the improvement of a scalable sparse direct solver for unsymmetrical linear equations, JOURNAL OF SUPERCOMPUTING, 73 (5), 1852-1904, http://dx.doi.org/10.1007/s11227-016-1892-73.
  198. Karatas, D., Tekin, A. and Celik, M.S. (2017). Density Functional Theory Computation of Organic Compound Penetration into Sepiolite Tunnels, CLAYS AND CLAY MINERALS, 65 (1), 1-13, http://dx.doi.org/10.1346/CCMN.2016.064043
  199. Salmas, R.E., Unlu, A., Bektas, M., Yurtsever, M., Mestanoglu, M. and Durdagi, S. (2017). Virtual screening of small molecules databases for discovery of novel PARP-1 inhibitors: combination of in silico and in vitro studies, JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 35 (9), 1899-1915; http://dx.doi.org/10.1080/07391102.2016.1199328
  200. Turkoglu, G., Cinar, M.E. and Ozturk, T. (2017). Synthesis and Photophysical and Anion-Sensing Properties of Triarylborane-Substituted Cross-Conjugated and Conjugated Thienothiophenes, EUROPEAN JOURNAL OF ORGANIC CHEMISTRY, (31), 4552-4561. http://dx.doi.org/10.1002/ejoc.201700679
  201. Gunay, S.D. (2017). Thermal recovery mechanisms of UO2 lattices by defect annihilation, JOURNAL OF ALLOYS AND COMPOUNDS, 724, 841-850. http://dx.doi.org/10.1016/j.jallcom.2017.07.100
  202. Cinar, S.A., Ziylan-Yavas, A., Catak, S., Ince, N.H. and Aviyente, V. (2017). Hydroxyl radical-mediated degradation of diclofenac revisited: a computational approach to assessment of reaction mechanisms and by-products, ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH, 24 (22),18458-18469. http://dx.doi.org/10.1007/s11356-017-9482-7
  203. Tedik Basaran, S., Gokceli, S., Karabulut Kurt, G., Ozdemir E. and Yaraneri, E. (2017). Error Performance Analysis of Random Network Coded Cooperation Systems, IEEE Transactions on Wireless Communications, 16 (8), 5325-5337. http://dx.doi.org/10.1109/TWC.2017.2708702
  204. Kreutzer, J. and Yagci, Y. (2017). One-component, double-chromophoric thioxanthone photoinitiators for free radical polymerization, JOURNAL OF POLYMER SCIENCE PART A-POLYMER CHEMISTRY, 55 (20), 3475-3482, http://dx.doi.org/10.1002/pola.287293.
  205. Kutahya, C., Allushi, A., Isci, R., Kreutzer, J., Ozturk, T., Yilmaz, G. and Yagci, Y. (2017) Photoinduced Metal-Free Atom Transfer Radical Polymerization Using Highly Conjugated Thienothiophene Derivatives, MACROMOLECULES, 50 (17), 6903-6910. http://dx.doi.org/10.1021/acs.macromol.7b01335
  206. Karatas, D., Tekin, A., Bahadori, F. and Celik, M.S. (2017) Interaction of curcumin in a drug delivery system including a composite with poly(lactic-co-glycolic acid) and montmorillonite: a density functional theory and molecular dynamics study, JOURNAL OF MATERIALS CHEMISTRY B, 5 (40), http://dx.doi.org/8070-8082; 10.1039/c7tb01964e
  207. Maciel, Y., Gungor, A.G. and Simens, M. (2017) Structural differences between small and large momentum-defect turbulent boundary layers, INTERNATIONAL JOURNAL OF HEAT AND FLUID FLOW, 67, 95-110. http://dx.doi.org/10.1016/j.ijheatfluidflow.2017.07.011
  208. Manukyan, A. and Tekin, A. (2017) The intermolecular dimer potential for guanine, JOURNAL OF CHEMICAL PHYSICS, 147 (15). http://dx.doi.org/10.1063/1.4998792
  209. Gurbuz, E,. Cahangirov, S., Durgun, E. and Ciraci, S. (2017) Single layers and multilayers of GaN and AlN in square-octagon structure: Stability, electronic properties, and functionalization, PHYSICAL REVIEW B, 96 (20).  http://dx.doi.org/10.1103/PhysRevB.96.205427
  210. Khanifaev, J., Pekoz, R., Konuk, M. and Durgun, E. (2017) The interaction of halogen atoms and molecules with borophene, Physical Chemistry Chemical Physics, 19 (42), pp. 28963-28969. http://dx.doi.org/10.1039/c7cp05793h
  211. Guventurk, C. and Sahin, M. (2017) An arbitrary Lagrangian-Eulerian framework with exact mass conservation for the numerical simulation of 2D rising bubble problem, International Journal for Numerical Methods in Engineering, 112 (13), pp. 2110-2134. http://dx.doi.org/10.1002/nme.5598
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  213.  Kayik, G., Tuzun, N.S. and Durdagi, S. (2017) Structural investigation of vesnarinone at the pore domains of open and open-inactivated states of hERG1 K+ channel, Journal of Molecular Graphics & Modelling, 77, 399-412, http://dx.doi.org/10.1016/j.jmgm.2017.08.017
  214. Yildirim, E., Yurtsever, M., Eriman, B. and Uyanik, N. (2018) Experimental and MD simulation study on the physical and mechanical properties of organically modified montmorillonite clay and compatibilized linear low density polyethylene nanocomposites, Journal of Applied Polymer Science, 135 (6) http://dx.doi.org/10.1002/app.45817
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  1. F. A. Konuklar. ICTAC-12, Varna-Bulgaristan. Mechanism of a Copper (I) Catalyzed Cycloaddition Reaction. 2008
  2. C. Özen, N. Ş. Tüzün, F. A. Konuklar. Chemical Physics 8, Istanbul 2008. A DFT Study on the Mechanism of Cyclopropanation via Cu(acac)2 Catalyzed Diazo Decomposition Reaction. 2008
  3. C. Özen, F. A. Konuklar ve N. Tüzün. ICTAC-12, 67, Varna, Bulgaristan, 2008. Reaction Mechanism of the Dioxepine with Dimethyl Diazomalonate via Copper-Carbene Species. 2008
  4. H. Topcuoglu, M. Ermis, M. Sifyan. The 9th International Conference on Intellegent Systems Design and Applications (ISDA’09), Pisa, Italy. Hybrid evolutionary algorithms for sensor placement on a 3D terrain. 2009
  5. S. Güryel, F.A. Konuklar, M. Yurtsever, T. Öztürk. DFT09, 31- Agustos-4 Eylül 2009, Lyon, Fransa.. A DT Study on the reaction mechanisms of some TTF derivatives obtained by coupling reactions. 2009
  6. O. Dönmez. 20-05-2009, Ahi Evran Üniversites, Kırşehir, Davetli Konuşma. Genel Rölativistik Hidrodinamik (GRH) Denklemlerinin Sayısal Yöntemler Kullanılarak Çözümlenmesi ve Dönen Kara Delikler Etrafında Oluşan Yığılma (Akresyon) Disklerinin Modellenmesi. 2009
  7. O Dönmez, L. Rezzolla, O. Zanotti. Alternative Solutions in Astrophysics & World Year of Astronomy, 6-11 September 2009. Modeling the Disk Dynamics Around the Rotating Black Hole – Interpreting the Origin of the Black Hole QPOs. 2009
  8. N. Ş. Tüzün, E. Boz, C. Özen. DFT09, Paris, Fransa, 2009. A DFT Study on the Mechanism of Ruthenium Catalyzed Azide-Alkyne Cycloaddition Reaction. 2009
  9. E. Aribas, S. Piskin, M.S. Celebi. V European Conference on Computational Fluid Dynamics ECCOMAS CFD 2010 J. C. F. Pereira and A. Sequeira (Eds) Lisbon, Portugal. SIMULATION OF BLOOD FLOW IN HUMAN AORTA INCLUDING THIRTEEN MAIN ARTERIES. 2010
  10. H. Turkeri, S. Piskin, M. S. Celebi. V European Conference on Computational Fluid Dynamics ECCOMAS CFD 2010 J. C. F. Pereira and A. Sequeira (Eds) Lisbon, Portugal. NON-NEWTONIAN BLOOD FLOW SIMULATION IN A REALISTIC ARTERY DOMAIN. 2010
  11. S.l Piskin, E. Aribas, M. S. Celebi. V European Conference on Computational Fluid Dynamics ECCOMAS CFD 2010 J. C. F. Pereira and A. Sequeira (Eds) Lisbon, Portugal. A 3D HUMAN CAROTID ARTERY SIMULATION USING REALISTIC GEOMETRY AND EXPERIMENTAL INPUT DATA. 2010
  12. A.S. Özen. The 6th Nanoscience and Nanotechnology Conference (NanoTR6), 15-18 Haziran, 2010, İzmir, Türkiye.. Computational Insigth into the Acceptor-Donor Type of Conducting Polymers Containing Pendant Fullerene Groups. 2010
  13. A.S. Özen. Kimyasal Fizik IX, 14-16 Ekim 2010, İzmir, Türkiye. Effect of the Solvent in the Acceptor-Donor Type of Conducting Polymers. 2010
  14. O. Dönmez, O. Zanotti, L. Rezzolla. 25th Texas Symposium on Relativistic Astrophysics, Heidelberg Germany, 6-10 December 2010. Numerical Simulations of QPOs in Bondi-Hoyle type accretion: the case of SgrA*. 2010
  15. D. Yıldıran, O. Dönmez. 27. Ulusal Fizik Kongresi, 14-17 Eylül 2010, İstanbul. Dönen Karadelikler etrafındaki şok konilerinin modellenmesi. 2010
  16. O. Dönmez, O. Zanotti, L. Rezzolla. XVII. Ulusal Astronomi Kongresi, 31 Ağustos- 4 Eylül 2010, Adana. Bondi-Hoyle Tipi Küte Birikimi Durumunda Dönen Karadelikler Etrafındaki QPO’ların Modellenmesi ve Sqr A* Karadeliği için Elde Edilen Gözlem Sonuçların ile Karşılaştırılması. 2010
  17. O. Dönmez, O. Zanotti, L. Rezzolla. COST ACTION MP0905 – BLACK HOLES IN A VIOLENT UNIVERSE, 3RD WORKING GROUPS MEETING . The flip-flop instability of the shock cone around the rotating black hole: the case of Sgr A*. 2011
  18. O. Dönmez. COST ACTION MP0905 – BLACK HOLES IN A VIOLENT UNIVERSE, 4RD WORKING GROUPS MEETING . Extracting QPOs from the disk dynamics around the Sgr A*: Numerical simulation of Bondi-Hoyle accretion . 2011
  19. B. Efe, S. Menteş, Y. Ünal, E. Tan, E. Unal, T. Ozdemir, B. Barutcu, B. Onal, S. Topcu. International Conference on Renewable Energy Research and Applications, November 11-12, Nagasaki, Japan (Submitted).. 72hr forecast of wind power in manisa turkey by using the wrf model coupled to windsim. 2012
  20. A. Duran, M.S. Celebi, M. Tuncel and B. Akaydın. PRACE-2IP white paper, Libraries, WP 43. Design and implementation of new hybrid algorithm and solver on CPU for large sparse linear systems. 2012
  21. M.S. Celebi, A. Duran, M. Tuncel and B. Akaydın. PRACE-2IP white paper, Libraries, WP 44. Scalable and improved SuperLU on GPU for heterogeneous systems. 2012
  22. O. Dönmez. The Biggest Accelerators in space and on earth . Instabilities of Accreated Torus Around the Black Holes . 2013
  23. F. Koyuncu, O. Dönmez. 29th International Physics Congress . Accretion disk dynamics around the Sgr A* black hole . 2013
  26. A. Duran, M.S. Celebi, B. Akaydin, M. Tuncel and F. Oztoprak. PRACE-1IP Extension white paper, Evaluations on Intel MIC, WP 135. Analysis of SuperLU Solvers on the Intel MIC Architecture,. 2013
  27. A. Duran, M.S. Celebi, M. Tuncel and F. Oztoprak. PRACE-2IP white paper, Scalable Algorithms, WP 82. Structural Analysis of Large Sparse Matrices for Scalable Direct Solvers. 2013
  28. M.S. Celebi, A. Duran, M. Tuncel, B. Akaydin and F. Oztoprak. PRACE-2IP white paper, Libraries, WP 83. Performance Analysis of BLAS Libraries in SuperLU_DIST for SuperLU_MCDT (Multi Core Distributed) Development. 2013